Publications

You can also find my articles on my Google Scholar profile.

Conference Papers


Towards Unifying Anatomy Segmentation: Automated Generation of a Full-Body CT Dataset

Published in 2024 IEEE International Conference on Image Processing (ICIP), 2024

Recommended citation: Jaus, Alexander; Seibold, Constantin; Hermann, Kelsey; Shahamiri, Negar; Walter, Alexandra; Giske, Kristina; Haubold, Johannes; Kleesiek, Jens; Stiefelhagen, Rainer; . (2024). "Towards Unifying Anatomy Segmentation: Automated Generation of a Full-Body CT Dataset." 2024 IEEE International Conference on Image Processing (ICIP): 41-47.
Download Paper

Muscles in time: Learning to understand human motion in-depth by simulating muscle activations

Published in Advances in Neural Information Processing Systems, 2024

Recommended citation: Schneider, David; Reiß, Simon; Kugler, Marco; Jaus, Alexander; Peng, Kunyu; Sutschet, Susanne; Sarfraz, M Saquib; Matthiesen, Sven; Stiefelhagen, Rainer; . (2024). "Muscles in time: Learning to understand human motion in-depth by simulating muscle activations." Advances in Neural Information Processing Systems. 37: 67251-67281.
Download Paper

LIMIS: Towards Language-based Interactive Medical Image Segmentation (Oral)

Published in International Symposium on Biomedical Imaging (ISBI), 2024

Recommended citation: Heinemann, L., Jaus, A., Marinov, Z., Kim, M., Spadea, M. F., Kleesiek, J., & Stiefelhagen, R. (2025, April). LIMIS: Towards Language-Based Interactive Medical Image Segmentation. In 2025 IEEE 22nd International Symposium on Biomedical Imaging (ISBI) (pp. 1-5). IEEE.
Download Paper

FootCapture: Towards an AR-based System for 3D Foot Object Acquisition through Photogrammetry

Published in Medical Imaging with Deep Learning, 2024

Recommended citation: Khan-Blouki, Valentin; Seiz, Franziska; Walter, Nicolas; Jaus, Alexander; Marinov, Zdravko; Luijten, Gijs; Egger, Jan; Seibold, Constantin Marc; Solte, Dirk; Kleesiek, Jens; Stiefelhagen, Rainer. (2024). "FootCapture: Towards an AR-based System for 3D Foot Object Acquisition through Photogrammetry." Medical Imaging with Deep Learning
Download Paper

Every Component Counts: Rethinking the Measure of Success for Medical Semantic Segmentation in Multi-Instance Segmentation Tasks

Published in Proceedings of the AAAI Conference on Artificial Intelligence 2025, 2024

Recommended citation: Jaus, Alexander; Seibold, Constantin; Reiß, Simon; Marinov, Zdravko; Li, Keyi; Ye, Zeling; Krieg, Stefan; Kleesiek, Jens; Stiefelhagen, Rainer; . (2024). "Every Component Counts: Rethinking the Measure of Success for Medical Semantic Segmentation in Multi-Instance Segmentation Tasks." Proceedings of the AAAI Conference on Artificial Intelligence 2025.
Download Paper

Anatomy-guided Pathology Segmentation

Published in International Conference on Medical Image Computing and Computer-Assisted Intervention, 2024

Recommended citation: Jaus, Alexander; Seibold, Constantin; Reiß, Simon; Heine, Lukas; Schily, Anton; Kim, Moon; Bahnsen, Fin Hendrik; Herrmann, Ken; Stiefelhagen, Rainer; Kleesiek, Jens; . (2024). "Anatomy-guided Pathology Segmentation." International Conference on Medical Image Computing and Computer-Assisted Intervention: 3-13.
Download Paper

Journal Contributions


Medshapenet–a large-scale dataset of 3d medical shapes for computer vision

Published in Biomedical Engineering/Biomedizinische Technik, 2025

Recommended citation: Li, Jianning; Zhou, Zongwei; Yang, Jiancheng; Pepe, Antonio; Gsaxner, Christina; Luijten, Gijs; Qu, Chongyu; Zhang, Tiezheng; Chen, Xiaoxi; Li, Wenxuan; . (2025). "Medshapenet–a large-scale dataset of 3d medical shapes for computer vision." Biomedical Engineering/Biomedizinische Technik. 70(1): 71-90.
Download Paper

Towards unifying anatomy segmentation: automated generation of a full-body ct dataset via knowledge aggregation and anatomical guidelines

Published in arXiv, 2023

Recommended citation: Jaus, Alexander; Seibold, Constantin; Hermann, Kelsey; Walter, Alexandra; Giske, Kristina; Haubold, Johannes; Kleesiek, Jens; Stiefelhagen, Rainer; . (2023). "Towards unifying anatomy segmentation: automated generation of a full-body ct dataset via knowledge aggregation and anatomical guidelines." arXiv preprint arXiv:2307.13375..
Download Paper